Your original settings after running the auto setup don't seem to make sense with the 200hz setting for your mains. If you are not getting proper readings with calibration gosh knows what it did with the equalization settings being accurate. You might want to try listening to the system with your current XO points with audyssey turned off and see if it sounds better or worse.

I’m armed and I’m drinking. You don’t want to listen to advice from me, amigo.

-Max Payne